EBI-Roadshow の変更点

[[Japanese page>EBI-Roadshow-jp]]

** EBI Roadshow at DBCLS [#a5d69663]

<a target=_blank href=""><img src="" align="right" alt="EBI Roadshow poster"></a>

The purpose of the roadshow is to train experimental biologists how to make the most of some of Europe's most widely used public biological databases, such as [[Ensembl>]], [[ArrayExpress>]], [[BioMart>]], [[Expression Atlas>]] and [[Reactome>]]. The roadshow combines presentations and hands-on practical sessions. Trainees are guided through the selected databases and tools by expert trainers from the European Bioinformatics Institute ([[EBI>]]), the Swiss Institute of Bioinformatics ([[SBI>]]), the European Patent Office ([[EPO>]]) and the [[BRENDA>]] project. More information is available on the [[Bioinformatics Roadshow website>]].

:Date| 5(Mon)/6(Tue) September 2011 &br;
//Please note: Schedule is subject to change depending on the rolling blackouts.
:Venue| [[Database Center for Life Science>]](Faculty of Engineering Bldg.12, The University of Tokyo, 2-11-16 Yayoi, Bunkyo-ku, Tokyo)
:Enrollment limit| 24
:Registration fee| Free
:Lunch| We will provide light meals for participants.
:PCs| Participants will be able to use PCs (Macbook) provided by DBCLS.
:Banquet (optional)| 5 September 17:30~ (3,000 Yen)

:Registration (closed)|
Deadline: 8 August 2011 &br;
// EBI roadshow at DBCLS registration form - closed
//<a href="" target="_blank">EBI roadshow at DBCLS registration form</a><br />
A successful registration will be followed by a confirmation e-mail. Should you not receive the confirmation e-mail, please contact us.

//---Registration form is closed. Thank you for many applications.

:Contact address (Send inquiries in Japanese or English)|
EBI-roadshow at

European Molecular Biology Laboratory - European Bioinformatics Institute ([[EMBL-EBI>]]) &br;
DNA Data Bank of Japan ([[DDBJ>]]), National Institute of Genetics ([[NIG>]]), Research Organization of Information and Systems ([[ROIS>]]) &br;
Database Center for Life Science ([[DBCLS>]]), [[ROIS>]]
National Bioscience Database Center ([[NBDC>]]), Japan Science and Technology Agency ([[JST>]])

** Program [#vfd32422]
:Day 1: Access to Genes and Genomes with Ensembl (Jana Vandrovcova) [[Lectures and exercises movie>]]|
:Day 1: Access to Genes and Genomes with Ensembl (Jana Vandrovcova) 【[[Lectures and exercises movie>]]】|
&color(white){0};9:00 - &color(white){0};9:15 Welcome remarks from the organizers &br;
&color(white){0};9:15 - &color(white){0};9:45 Introduction to [[EBI>]]: overview of most relevant databases (Lecture) &br;
&color(white){0};9:45 - 11:15 Origin, goals, data and analysis in the [[Ensembl>]] project Website Walkthrough &br;
11:15 - 11:30 Coffee Break &br;
11:30 - 12:15 [[Ensembl>]] exercises &br; 
12:15 - 13:15 Lunch &br;
13:15 - 14:15 Retrieving datasets using the data mining tool [[BioMart>]] (Lecture and exercises) &br;
14:15 - 15:15 Comparative genomics and proteomics: orthologues, protein families, whole genome alignments and syntenic regions (Lecture and exercises) &br;
15:15 - 15:30 Coffee break &br;
15:30 - 16:30 Variations: Single nucleotide polymorphisms in [[Ensembl>]], comparison of strains, breeds, individuals using the browser and [[BioMart>]] (Lecture and exercises) &br;
16:30 - 17:15 Case Study Exercises, or browse your own gene or region

:Day 2: Transcriptomics and Pathways (James Watson) [[Lectures and exercises movie>]]|
:Day 2: Transcriptomics and Pathways (James Watson) 【[[Lectures and exercises movie>]]】|
&color(white){0};9:00 - 10:30 Functional Genomics resources at the EBI: [[ArrayExpress>]] and [[Expression Atlas>]] (Lecture) &br;
10:30 - 10:45 Coffee break &br;
10:45 - 12:30 [[ArrayExpress>]]/[[Atlas>]] exercises &br;
12:30 - 13:30 Lunch &br;
13:30 - 15:30 [[Reactome>]]: a curated biological pathway database (Lecture and hands on) &br;
15:30 - 15:45 Coffee break &br;
15:45 - 17:00 More exercises & Questions &br;

** Other EBI Roadshows in Japan [#sb64ea44]
&color(white){00/0};7 September 2011 Showa Pharmaceutical University, Tokyo &br;
&color(white){00};8/9 September 2011 RIKEN, Yokohama &br;
12/13 September 2011 Osaka University, Osaka &br;
//15/16 September 2011 CiRA, Kyoto &br;
15/16 September 2011 OIST, Okinawa

For details, please visit